BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB017G01LP1|AL427198
(752 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1503 915 0.0
>3x_Contig1503
Length = 10719
Score = 915 bits (458), Expect = 0.0
Identities = 518/534 (97%), Gaps = 7/534 (1%)
Strand = Plus / Minus
Query: 219 agattggcaagtttcgatgggatccgattatggtgtgtttggatactgtcgaaratgacg 278
||||||||||||||||||||||||| ||||||||||||||||||||||| ||| ||||||
Sbjct: 2652 agattggcaagtttcgatgggatcc-attatggtgtgtttggatactgt-gaagatgacg 2595
Query: 279 gtggttcatgttcttctggctaagggcgaattatcacccggacaaatttgagatgacgat 338
|||||||||||||||||| || ||| |||||||||||||||| ||||||| |||||||||
Sbjct: 2594 gtggttcatgttcttctg-ctcagg-cgaattatcacccgga-aaatttg-gatgacgat 2539
Query: 339 gattcgaattggaagatgaataacgattcgagaaaagccttgggtagtatcttgatcgtr 398
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2538 gattcgaattggaagatgaataacgattcgagaaaagccttgggtagtatcttgatcgtg 2479
Query: 399 acaccaatcgctgctgggttaacgtttttagcattggtcactagtttcctatgccaattc 458
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2478 acaccaatcgctgctgggttaacgtttttagcattggtcactagtttcctatgccaattc 2419
Query: 459 aggttctttgattcgagcactttctggtttgttatgaatttcttgttctccatcttggca 518
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2418 aggttctttgattcgagcactttctggtttgttatgaatttcttgttctccatcttggca 2359
Query: 519 tttttatcgctctgctcttatctgcatcgtggtgatccttttgttttatcctcacgttac 578
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2358 tttttatcg-tctgctcttatctgcatcgtggtgatccttttgttttatcctcacgttac 2300
Query: 579 gtggtactcgtatattttaattgcttctgctgtgttgaatttggtttgcktgccgtkatg 638
||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||
Sbjct: 2299 gtggtactcgtatattttaattgcttctgctgtgttgaatttggtttgcttgccgttatg 2240
Query: 639 tttcttkgctcgttctcaaacggcttctaatagthagarcggacttgtcgatgaagaaga 698
|||||| ||||||||||||||||||||||||||| ||| |||||||||||||||||||||
Sbjct: 2239 tttctttgctcgttctcaaacggcttctaatagtaagaacggacttgtcgatgaagaaga 2180
Query: 699 tgaagatcgttcttcaacgtctatcagagacaaattttataaagaagagtktaa 752
|||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 2179 tgaagatcgttcttcaacgtctatcagagacaaattttataaagaagagtttaa 2126
Score = 348 bits (174), Expect = 1e-95
Identities = 174/174 (100%)
Strand = Plus / Minus
Query: 2 ttgtgtctctccgctgatttcaacttggaggagttaaaagggctccagtttaatatctaa 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2859 ttgtgtctctccgctgatttcaacttggaggagttaaaagggctccagtttaatatctaa 2800
Query: 62 tactgaccttatactcagtatactgatataagacgaatggccaagaggtttacgttcggg 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2799 tactgaccttatactcagtatactgatataagacgaatggccaagaggtttacgttcggg 2740
Query: 122 tttgcaacccttttgtttttcctgcagtgtgtggcattagcctttctaattttg 175
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2739 tttgcaacccttttgtttttcctgcagtgtgtggcattagcctttctaattttg 2686
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.32
Gapped
Lambda K H
1.38 0.712 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5745
Number of Sequences: 1807
Number of extensions: 5745
Number of successful extensions: 171
Number of sequences better than 1.0e-20: 1
length of query: 752
length of database: 10,358,551
effective HSP length: 16
effective length of query: 736
effective length of database: 10,329,639
effective search space: 7602614304
effective search space used: 7602614304
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (30.0 bits)
S1: 12 (24.5 bits)
S2: 50 (100.4 bits)